A Member of the Rieveschl Laboratories for Mass Spectrometry

in the College of Arts & Sciences' Department of Chemistry

Publications 2006-2008

Durairaj, A.; Limbach, P.A. “MALDI-MS Screening for Pseudouridine in Mixtures of Small RNAs by Chemical Derivatization, RNase Digestion and Signature Products” Rapid Communications in Mass Spectrometry 22 (2008) 3727-3734. PMID: 18973194 PMCID: PMC3009585. [Link]

Brock, J.E.; Pourshahian, S.; Limbach, P.A.; Janssen, G.R. “Ribosome Binding to Leaderless mRNA through Recognition of their 5’-terminal AUG”, RNA 14 (2008) 2159-2169. PMID: 18755843 PMCID: PMC2553737. [Link]

Durairaj, A.; Limbach, P.A. “Mass Spectrometry of the Fifth Nucleoside: A Review of the Identification of Pseudouridine in Nucleic Acids”, Analytica Chimica Acta 623 (2008) 117-125. PMID: 18620915 PMCID: PMC2597214. [Link]

Pourshahian, S.P.; Limbach, P.A. “Application of Delta Mass for the Identification of Peptide:Oligonucleotide Cross-links by Mass Spectrometry”, Journal of Mass Spectrometry 42 (2008) 1081-1088. PMID: 18320553 PMCID: PMC3008158. [Link]

Gong, M.; Nikcevic, I.; Hallsall, H.B.; Wehmeyer, K.R.; Limbach, P.A.; Heineman, W.R., “Protein-Aptamer Binding Studies Using Microchip Affinity Capillary Electrophoresis”, Electrophoresis 29 (2008) 1415-1422. PMID: 18324729. [Link]

Durairaj, A.; Limbach, P.A. “Improving CMC Derivatization of Pseudouridine in RNA for Mass Spectrometric Detection”, Anal. Chim. Acta 612 (2008) 173-181. PMID: 18358863 PMCID: PMC2424252. [Link]

Mecomber, J.S.; Murthy, R.J.; Rajam, S.; Singh, P.N.D.; Gudmundsdottir, A.D.; Limbach, P.A. “Photochemical Functionalization of Polymer Surfaces for Microfabricated Devices”, Langmuir 24 (2008) 3645-3653. PMID: 18294015. [Link]

Platt, M.D.; Schurr, M.J.; Sauer, K.; Vazquez, G.; Kukavica-Ibrulj, I.; Potvin, E.; Levesque, R.C.; Fedynak, A.; Brinkman, F.S.; Schurr, J.; Hwang, S.H.; Lau, G.W.; Limbach, P.A.; Rowe, J.J.; Lieberman, M.A.; Barraud, N.; Webb, J.; Kjelleberg, S.; Hunt, D.F.; Hassett, D.J. “Proteomic, microarray, and signature-tagged mutagenesis analyses of anaerobic Pseudomonas aeruginosa at pH 6.5, likely representing chronic, late-stage cystic fibrosis airway conditions”, J. Bacteriol. 190 (2008) 2739-2758. PMID: 18203836 PMCID: PMC2293228. [Link]

Gong, M.; Wehmeyer, K.R.; Limbach, P.A.; Heineman, W.R. “Flow manipulation for sweeping with a cationic surfactant in microchip capillary electrophoresis”, J. Chrom. A 1167 (2007) 217-224. PMID: 17826787 PMCID: PMC2716996. [Link]

Duderstadt, R.E.; Tsuie, B.M.; Macha, S.F.; Limbach, P.A. “Investigation of Single-Site Zirconium Azaborolinyl Complexes by Laser Desorption Ionization Time-of-Flight Mass Spectrometry, Anal. Chim. Acta 596 (2007) 124-131. PMID: 17616249. [Link]

Suh, M.J.; Pourshahian, S.; Limbach, P.A. “Developing Limited Proteolysis and Mass Spectrometry for the Characterization of Ribosome Topography”, J. Am. Soc. Mass Spectrom. 18 (2007) 1304-1317. PMID: 17521915 PMCID: PMC2190778. [Link]

Nikcevic, I.; Lee, S.-H.; Piruska, A.; Ahn, C.; Ridgway, T.H.; Limbach, P.A.; Wehymeyer, K.R.; Heineman, W.R.; Seliskar, C.J., “Characterization and performance of injection molded poly(methylmethacrylate) microchips for capillary electrophoresis”, J. Chrom. A 1154 (2007) 444-453. PMID: 17477932 PMCID: PMC2716998. [Link]

Gong, M.; Wehmeyer, K.R.; Stalcup, A.M.; Limbach, P.A.; Heineman, W.R., “Study of injection bias in a simple hydrodynamic injection in microchip capillary electrophoresis”, Electrophoresis 28 (2007) 1564-1571. PMID: 17447241 PMCID: PMC2442562. [Link]

Gong, M.; Wehmeyer, K.R.; Limbach, P.A.; Heineman, W.R., “Frontal analysis in microchip capillary electrophoresis: a simple and accurate method for determination of protein-DNA dissociation constant”, Electrophoresis 28 (2007) 837-842. PMID: 17315151. [Link]

Hossain, M.; Limbach, P.A.; “Mass Spectrometry-Based Detection of Transfer RNAs by Their Signature Endonuclease Digestion Products” RNA 13 (2007) 295-303. PMID: 17194720 PMCID: PMC1781365. [Link]

Wetherill, Y.B.; Hess-Wilson, J.K.; Comstock, C.E.S.; Shah, S.A.; Buncher, C.R.; Sallans,L.; Limbach, P.A.; Schwemberger, S.; Babcock, G.F.; Knudsen, K.E.; “Bisphenol A facilitates bypass of androgen ablation therapy in  prostate cancer” Mol Cancer Therapeutics 5 (2006) 3181-3190. PMID: 17172422. [Link]

McLachlan, A.; Borchers, M.; Velayutham, P.; Wagner, M.; Limbach, P.A.; “Characterizing the Reproducibility of a Protein Profiling Method for the Analysis of Mouse Bronchoalveolar Lavage Fluid”, J. Proteome Res. 5 (2006) 3059-3065. PMID: 17081057. [Link]

Gong, M.; Wehmeyer, K.R.; Limbach, P.A.; Heineman, W.R., “Unlimited-volume Electrokinetic Stacking Injection in Sweeping Capillary Electrophoresis Using a Cationic Surfactant”, Anal. Chem. 78 (2006) 6035-6042. PMID: 16944881 PMCID: PMC2442015. [Link]

Gong, M.; Wehmeyer, K.R.; Limbach, P.A.; Heineman, W.R., “On-line Sample Preconcentration by Sweeping with Dodecyltrimethylammonium Bromide in Capillary Zone Electrophoresis”, J. Chrom. A 1125 (2006) 263-269. PMID: 16808920 PMCID: PMC2442016. [Link]

Gong, M.; Wehmeyer, K.R.; Limbach, P.A.; Arias, F.; Heineman, W.R., “On-line Sample Preconcentration using Field-Amplified Stacking Injection in Microchip Capillary Electrophoresis”, Anal. Chem. 78 (2006) 3730-3737. PMID: 16737230 PMCID: PMC2442013. [Link]

Meng, Z.; Limbach, P.A., “Mass Spectrometry of RNA: Linking the Genome to the Proteome”, Briefings in Functional Genomics & Proteomics 5 (2006) 87-95. PMID: 16769684 PMCID: PMC2442014. [Link]

Carr, J.F.; Hamburg, D.-M.; Gregory, S.T.; Limbach, P.A.; Dahlberg, A.E., “Effect of Streptomycin-resistance Mutations on the Post-translational Modification of Ribosomal Protein S12”, J. Bacteriol. 188 (2006) 2020-2023. PMID: 16484214 PMCID: PMC1426572. [Link]

Mecomber, J.S.; Stalcup, A.M.; Hurd, D; Halsall, H.B.; Heineman, W.R.; Seliskar, C.J.; Wehmeyer, K.R.; Limbach, P.A., “Analytical Performance of Polymer-Based Microfluidic Devices Fabricated by CNC Machining” Anal. Chem. 78 (2006) 936-941. PMID: 16448071. [Link]